matlab-based opennanopore software Search Results


matlab-based opennanopore software  (MathWorks Inc)
90
MathWorks Inc matlab-based opennanopore software
Matlab Based Opennanopore Software, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/matlab-based opennanopore software/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
matlab-based opennanopore software - by Bioz Stars, 2026-03
90/100 stars
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homemade matlab software package  (MathWorks Inc)
96
MathWorks Inc homemade matlab software package
Homemade Matlab Software Package, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/homemade matlab software package/product/MathWorks Inc
Average 96 stars, based on 1 article reviews
homemade matlab software package - by Bioz Stars, 2026-03
96/100 stars
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homemade matlab software package based on opennanopore (version 1.2)  (MathWorks Inc)
90
MathWorks Inc homemade matlab software package based on opennanopore (version 1.2)
Overall scheme of nanospectral data analysis. Raw current blockade signals stored in ABFs are analyzed by a homemade software package based on <t>OpenNanopore</t> to extract nanospectra, which are filtered to remove those with short duration times. The orientations of nanospectra are determined by comparing original and flipped empirical nanospectra with the theoretical nanospectra of the peptide, and backward empirical nanospectra are flipped. The averaging or progressive alignment method is employed to generate a consensus empirical nanospectrum. A theoretical nanospectrum is generated using the 1AAV or 1AAV-P model. Finally, the empirical consensus nanospectrum is aligned with the theoretical nanospectrum using DTW to find an alignment between the two nanospectra, and the PCC of the aligned nanospectra is computed.
Homemade Matlab Software Package Based On Opennanopore (Version 1.2), supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/homemade matlab software package based on opennanopore (version 1.2)/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
homemade matlab software package based on opennanopore (version 1.2) - by Bioz Stars, 2026-03
90/100 stars
  Buy from Supplier

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Overall scheme of nanospectral data analysis. Raw current blockade signals stored in ABFs are analyzed by a homemade software package based on OpenNanopore to extract nanospectra, which are filtered to remove those with short duration times. The orientations of nanospectra are determined by comparing original and flipped empirical nanospectra with the theoretical nanospectra of the peptide, and backward empirical nanospectra are flipped. The averaging or progressive alignment method is employed to generate a consensus empirical nanospectrum. A theoretical nanospectrum is generated using the 1AAV or 1AAV-P model. Finally, the empirical consensus nanospectrum is aligned with the theoretical nanospectrum using DTW to find an alignment between the two nanospectra, and the PCC of the aligned nanospectra is computed.

Journal: Scientific Reports

Article Title: Calling the amino acid sequence of a protein/peptide from the nanospectrum produced by a sub-nanometer diameter pore

doi: 10.1038/s41598-022-22305-x

Figure Lengend Snippet: Overall scheme of nanospectral data analysis. Raw current blockade signals stored in ABFs are analyzed by a homemade software package based on OpenNanopore to extract nanospectra, which are filtered to remove those with short duration times. The orientations of nanospectra are determined by comparing original and flipped empirical nanospectra with the theoretical nanospectra of the peptide, and backward empirical nanospectra are flipped. The averaging or progressive alignment method is employed to generate a consensus empirical nanospectrum. A theoretical nanospectrum is generated using the 1AAV or 1AAV-P model. Finally, the empirical consensus nanospectrum is aligned with the theoretical nanospectrum using DTW to find an alignment between the two nanospectra, and the PCC of the aligned nanospectra is computed.

Article Snippet: The nanospectra in ABFs were extracted using a homemade MATLAB software package based on OpenNanopore (version 1.2) .

Techniques: Software, Generated